science/cantera: update 3.1.0 → 3.2.0

science/cantera/Makefile

@@ -1,7 +1,6 @@
 PORTNAME=	cantera
 DISTVERSIONPREFIX=	v
-DISTVERSION=	3.1.0
-PORTREVISION=	7
+DISTVERSION=	3.2.0
 CATEGORIES=	science # chemistry physics
 
 MAINTAINER=	yuri@FreeBSD.org
@@ -15,19 +14,24 @@ LICENSE_FILE=	${WRKSRC}/License.txt
 BUILD_DEPENDS=	googletest>0:devel/googletest \
 		${LOCALBASE}/include/boost/algorithm/string.hpp:devel/boost-libs \
 		highfive>0:science/highfive \
-		${PYTHON_PKGNAMEPREFIX}packaging>=0:devel/py-packaging@${PY_FLAVOR}
+		doxygen:devel/doxygen \
+		${PYTHON_PKGNAMEPREFIX}Jinja2>0:devel/py-Jinja2@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}packaging>=0:devel/py-packaging@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}ruamel.yaml>0:devel/py-ruamel.yaml@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}typing-extensions>=0:devel/py-typing-extensions@${PY_FLAVOR} \
+
 LIB_DEPENDS=	libfmt.so:devel/libfmt \
 		libhdf5.so:science/hdf5 \
 		libopenblas.so:math/openblas \
 		libyaml-cpp.so:devel/yaml-cpp
 
-USES=		compiler:c++17-lang eigen:3 gettext-runtime localbase scons
+USES=		compiler:c++17-lang eigen:3 gettext-runtime localbase python scons
 USE_LDCONFIG=	yes
 
 USE_GITHUB=	yes
 GH_ACCOUNT=	Cantera
 GH_TUPLE=	LLNL:sundials:887af43:sundials/ext/sundials # bundled sundials is only needed for the Octave option
-GH_TUPLE+=	cantera:cantera-example-data:1a5d27e:example_data/data/example_data
+GH_TUPLE+=	cantera:cantera-example-data:b9e0731:example_data/data/example_data
 
 NO_CCACHE=	yes # ccache breaks scons build for some reason
 
@@ -35,6 +39,8 @@ MAKE_ARGS=	system_eigen='y' \
 		system_sundials='n' \
 		system_fmt='y' \
 		system_yamlcpp='y' \
+		system_highfive='y' \
+		f90_interface='n' \
 		googletest='system' \
 		sundials_include='${LOCALBASE}/include/sundials' \
 		extra_inc_dirs="${LOCALBASE}/include:${LOCALBASE}/include/eigen3" \
@@ -59,11 +65,9 @@ OCTAVE_SUB_FILES=	pkg-message-octave
 OCTAVE_USES=		octave:env
 OCTAVE_BROKEN=		Octave support needs to be updated
 
-PYTHON_USES=		python
-PYTHON_USES_OFF=	python:env
 PYTHON_USE=		PYTHON=cython
-PYTHON_MAKE_ARGS=	python_cmd=${PYTHON_CMD} python_package=full
-PYTHON_MAKE_ARGS_OFF=	python_package="none"
+PYTHON_MAKE_ARGS=	python_cmd=${PYTHON_CMD} python_package=y
+PYTHON_MAKE_ARGS_OFF=	python_package="n"
 PYTHON_BUILD_DEPENDS=	${PY_SETUPTOOLS} \
 			${PYTHON_PKGNAMEPREFIX}numpy>=1.16:math/py-numpy@${PY_FLAVOR} \
 			${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} \

science/cantera/distinfo

@@ -1,7 +1,7 @@
-TIMESTAMP = 1734670500
-SHA256 (Cantera-cantera-v3.1.0_GH0.tar.gz) = 4d9004660d83ea5200216cbd465ae77277fde9191fd47d1eb30a68c1ad6ee09e
-SIZE (Cantera-cantera-v3.1.0_GH0.tar.gz) = 2605640
+TIMESTAMP = 1779779043
+SHA256 (Cantera-cantera-v3.2.0_GH0.tar.gz) = f01e25e33f9d5e37db7ababe5af36b60caabff52dba04bb221d53e44735f60ec
+SIZE (Cantera-cantera-v3.2.0_GH0.tar.gz) = 2817937
 SHA256 (LLNL-sundials-887af43_GH0.tar.gz) = 147919c4887c93157c9975f195e8d45903285b61303d42f9dfdee251468abdb7
 SIZE (LLNL-sundials-887af43_GH0.tar.gz) = 18888776
-SHA256 (cantera-cantera-example-data-1a5d27e_GH0.tar.gz) = 4c174c322c9c4bf4cbb878e4c7785dc12ced5541ecb129481e05b990cdd9b3d7
-SIZE (cantera-cantera-example-data-1a5d27e_GH0.tar.gz) = 244544
+SHA256 (cantera-cantera-example-data-b9e0731_GH0.tar.gz) = eb7c843e413d78591127f61c3dfe1a9df05d338db2f0522d9e17195812013df6
+SIZE (cantera-cantera-example-data-b9e0731_GH0.tar.gz) = 260528

science/cantera/files/patch-SConstruct

@@ -1,8 +1,8 @@
 - the first part is fixing the configure failure, see https://github.com/Cantera/cantera/issues/1536
 
---- SConstruct.orig	2024-12-16 23:22:11 UTC
+--- SConstruct.orig	2025-11-17 22:34:45 UTC
 +++ SConstruct
-@@ -902,6 +902,9 @@ if os.name == "nt":
+@@ -900,6 +900,9 @@ if os.name == "nt":
      for key,val in env["ENV"].items():
          env["ENV"][key] = str(val)
  
@@ -12,7 +12,7 @@
  else:
      env["INSTALL_MANPAGES"] = True
  
-@@ -933,6 +936,9 @@ elif "clang" in env.subst("$CC"):
+@@ -931,6 +934,9 @@ elif "clang" in env.subst("$CC"):
  elif "clang" in env.subst("$CC"):
      config.select("clang")
  
@@ -22,7 +22,7 @@
  else:
      # Assume a GCC compatible compiler if nothing else
      logger.warning(f"Unrecognized C compiler {env['CC']!r}")
-@@ -991,10 +997,10 @@ if 'sphinx' in COMMAND_LINE_TARGETS:
+@@ -979,10 +985,10 @@ if 'sphinx' in COMMAND_LINE_TARGETS:
      env['doxygen_docs'] = True
  if 'sphinx' in COMMAND_LINE_TARGETS:
      env['sphinx_docs'] = True

science/cantera/files/patch-platform_posix_SConscript

@@ -1,6 +1,6 @@
---- platform/posix/SConscript.orig	2023-08-23 04:54:38 UTC
+--- platform/posix/SConscript.orig	2025-11-17 22:34:45 UTC
 +++ platform/posix/SConscript
-@@ -6,7 +6,7 @@ Import('env', 'build', 'install')
+@@ -4,7 +4,7 @@ localenv = env.Clone()
  localenv = env.Clone()
  
  # Copy man pages

science/cantera/files/patch-site__scons_buildutils.py

@@ -0,0 +1,14 @@
+-- Lowercase the platform name to match what pip wheel generates on FreeBSD.
+
+--- site_scons/buildutils.py.orig
+	2026-05-26 07:15:56 UTC
++++ site_scons/buildutils.py
+@@ -1317,7 +1317,7 @@ def setup_python_env(env):
+     py_version_short = parse_version(info["py_version_short"])
+     py_version_full = parse_version(info["py_version"])
+     py_version_nodot = info["py_version_nodot"]
+-    plat = info['plat'].replace('-', '_').replace('.', '_')
++    plat = info['plat'].replace('-', '_').replace('.', '_').lower()
+     numpy_include = info["numpy_include"]
+     env.Prepend(CPPPATH=Dir('#include'))
+     if env["system_sundials"] == "n":

science/cantera/pkg-plist

@@ -30,15 +30,6 @@ include/cantera/base/logger.h
 include/cantera/base/stringUtils.h
 include/cantera/base/utilities.h
 include/cantera/base/yaml.h
-include/cantera/clib/clib_defs.h
-include/cantera/clib/ct.h
-include/cantera/clib/ctfunc.h
-include/cantera/clib/ctmatlab.h
-include/cantera/clib/ctmultiphase.h
-include/cantera/clib/ctonedim.h
-include/cantera/clib/ctreactor.h
-include/cantera/clib/ctrpath.h
-include/cantera/clib/ctsurf.h
 include/cantera/core.h
 include/cantera/cython/funcWrapper.h
 include/cantera/cython/kinetics_utils.h
@@ -154,6 +145,8 @@ include/cantera/numerics/AdaptivePreconditioner.h
 include/cantera/numerics/BandMatrix.h
 include/cantera/numerics/CVodesIntegrator.h
 include/cantera/numerics/DenseMatrix.h
+include/cantera/numerics/EigenSparseDirectJacobian.h
+include/cantera/numerics/EigenSparseJacobian.h
 include/cantera/numerics/Func1.h
 include/cantera/numerics/Func1Factory.h
 include/cantera/numerics/FuncEval.h
@@ -162,7 +155,10 @@ include/cantera/numerics/IdasIntegrator.h
 include/cantera/numerics/Integrator.h
 include/cantera/numerics/PreconditionerBase.h
 include/cantera/numerics/PreconditionerFactory.h
+include/cantera/numerics/SteadyStateSystem.h
 include/cantera/numerics/SundialsContext.h
+include/cantera/numerics/SystemJacobian.h
+include/cantera/numerics/SystemJacobianFactory.h
 include/cantera/numerics/ctlapack.h
 include/cantera/numerics/eigen_dense.h
 include/cantera/numerics/eigen_sparse.h
@@ -178,7 +174,6 @@ include/cantera/oneD/MultiJac.h
 include/cantera/oneD/MultiNewton.h
 include/cantera/oneD/OneDim.h
 include/cantera/oneD/Sim1D.h
-include/cantera/oneD/StFlow.h
 include/cantera/oneD/refine.h
 include/cantera/onedim.h
 include/cantera/reactionpaths.h
@@ -188,6 +183,7 @@ include/cantera/thermo/BinarySolutionTabulatedThermo.h
 include/cantera/thermo/ConstCpPoly.h
 include/cantera/thermo/CoverageDependentSurfPhase.h
 include/cantera/thermo/DebyeHuckel.h
+include/cantera/thermo/EEDFTwoTermApproximation.h
 include/cantera/thermo/EdgePhase.h
 include/cantera/thermo/Elements.h
 include/cantera/thermo/GibbsExcessVPSSTP.h
@@ -250,6 +246,8 @@ include/cantera/transport/TransportData.h
 include/cantera/transport/TransportFactory.h
 include/cantera/transport/UnityLewisTransport.h
 include/cantera/transport/WaterTransport.h
+include/cantera/zeroD/ConnectorFactory.h
+include/cantera/zeroD/ConnectorNode.h
 include/cantera/zeroD/ConstPressureMoleReactor.h
 include/cantera/zeroD/ConstPressureReactor.h
 include/cantera/zeroD/FlowDevice.h
@@ -271,6 +269,21 @@ include/cantera/zeroD/Wall.h
 include/cantera/zeroD/WallFactory.h
 include/cantera/zeroD/flowControllers.h
 include/cantera/zerodim.h
+include/cantera_clib/clib_defs.h
+include/cantera_clib/ct.h
+include/cantera_clib/ctconnector.h
+include/cantera_clib/ctdomain.h
+include/cantera_clib/ctfunc.h
+include/cantera_clib/ctkin.h
+include/cantera_clib/ctmix.h
+include/cantera_clib/ctonedim.h
+include/cantera_clib/ctrdiag.h
+include/cantera_clib/ctreactor.h
+include/cantera_clib/ctreactornet.h
+include/cantera_clib/ctrxn.h
+include/cantera_clib/ctsol.h
+include/cantera_clib/ctthermo.h
+include/cantera_clib/cttrans.h
 %%OCTAVE%%lib/cantera/matlab/toolbox/1D/@Domain1D/Domain1D.m
 %%OCTAVE%%lib/cantera/matlab/toolbox/1D/@Domain1D/clear.m
 %%OCTAVE%%lib/cantera/matlab/toolbox/1D/@Domain1D/componentIndex.m
@@ -614,26 +627,34 @@ lib/libcantera.a
 %%PYTHON%%lib/libcantera_python3_11.so
 lib/libcantera_shared.so
 lib/libcantera_shared.so.3
-lib/libcantera_shared.so.3.1.0
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.1.0.dist-info/INSTALLER
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.1.0.dist-info/LICENSE.txt
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.1.0.dist-info/METADATA
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.1.0.dist-info/RECORD
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.1.0.dist-info/REQUESTED
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.1.0.dist-info/WHEEL
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.1.0.dist-info/direct_url.json
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.1.0.dist-info/entry_points.txt
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.1.0.dist-info/top_level.txt
+lib/libcantera_shared.so.3.2.0
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.2.0.dist-info/INSTALLER
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.2.0.dist-info/LICENSE.txt
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.2.0.dist-info/METADATA
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.2.0.dist-info/RECORD
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.2.0.dist-info/REQUESTED
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.2.0.dist-info/WHEEL
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.2.0.dist-info/direct_url.json
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.2.0.dist-info/entry_points.txt
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.2.0.dist-info/top_level.txt
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__init__.pxd
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__init__.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__init__.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/_cantera%%PYTHON_TAG%%.so
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/_onedim.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/_onedim.pyi
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/_types.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/_utils.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/_utils.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/ck2yaml.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/ck2yaml.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/composite.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/composite.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/constants.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/constants.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/ctcxx.pxd
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/cti2yaml.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/cti2yaml.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/ctml2yaml.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/KOH.yaml
@@ -644,13 +665,15 @@ lib/libcantera_shared.so.3.1.0
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/diamond.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/element-standard-entropies.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/YZA.yaml
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/air-plasma-Phelps.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/ammonia-CO-H2-Alzueta-2023.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/ammonia-Ru-Ba-YSZ-CSM-2019.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/co2-thermo.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/covdepsurf.yaml
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/methane-plasma-pavan-2023.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/n-hexane-NUIG-2015.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/oxygen-plasma-itikawa.yaml
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/silicon_carbide.yaml
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/example_data/silicon-carbide.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/graphite.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/gri30.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/gri30_highT.yaml
@@ -668,32 +691,51 @@ lib/libcantera_shared.so.3.1.0
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/sofc.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/data/water.yaml
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/delegator.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/delegator.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/drawnetwork.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/drawnetwork.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/examples/README.txt
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/func1.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/func1.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/interrupts.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/jacobians.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/jacobians.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/kinetics.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/kinetics.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/liquidvapor.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/lxcat2yaml.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/mixture.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/mixture.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/onedim.py
-%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/preconditioners.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/onedim.pyi
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/py.typed
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/reaction.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/reaction.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/reactionpath.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/reactionpath.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/reactor.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/reactor.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/solutionbase.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/solutionbase.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/speciesthermo.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/speciesthermo.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/README.txt
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/thermo.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/thermo.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/transport.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/transport.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/units.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/units.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/utils.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/with_units/__init__.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/with_units/solution.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/with_units/solution.pyi
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/yaml2ck.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/yamlwriter.pxd
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/yamlwriter.pyi
 libdata/pkgconfig/cantera.pc
 %%DATADIR%%/data/KOH.yaml
+%%DATADIR%%/data/README.md
 %%DATADIR%%/data/SiF4_NH3_mec.yaml
 %%DATADIR%%/data/air.yaml
 %%DATADIR%%/data/airNASA9.yaml
@@ -701,13 +743,15 @@ libdata/pkgconfig/cantera.pc
 %%DATADIR%%/data/diamond.yaml
 %%DATADIR%%/data/element-standard-entropies.yaml
 %%DATADIR%%/data/example_data/YZA.yaml
+%%DATADIR%%/data/example_data/air-plasma-Phelps.yaml
 %%DATADIR%%/data/example_data/ammonia-CO-H2-Alzueta-2023.yaml
 %%DATADIR%%/data/example_data/ammonia-Ru-Ba-YSZ-CSM-2019.yaml
 %%DATADIR%%/data/example_data/co2-thermo.yaml
 %%DATADIR%%/data/example_data/covdepsurf.yaml
+%%DATADIR%%/data/example_data/methane-plasma-pavan-2023.yaml
 %%DATADIR%%/data/example_data/n-hexane-NUIG-2015.yaml
 %%DATADIR%%/data/example_data/oxygen-plasma-itikawa.yaml
-%%DATADIR%%/data/example_data/silicon_carbide.yaml
+%%DATADIR%%/data/example_data/silicon-carbide.yaml
 %%DATADIR%%/data/graphite.yaml
 %%DATADIR%%/data/gri30.yaml
 %%DATADIR%%/data/gri30_highT.yaml
@@ -772,7 +816,7 @@ libdata/pkgconfig/cantera.pc
 %%PYTHON%%%%DATADIR%%/samples/python/kinetics/diamond_cvd.py
 %%PYTHON%%%%DATADIR%%/samples/python/kinetics/extract_submechanism.py
 %%PYTHON%%%%DATADIR%%/samples/python/kinetics/interactive_path_diagram.py
-%%PYTHON%%%%PYTHON%%%%DATADIR%%/samples/python/kinetics/jet_stirred_reactor.py
+%%PYTHON%%%%DATADIR%%/samples/python/kinetics/jet_stirred_reactor.py
 %%PYTHON%%%%DATADIR%%/samples/python/kinetics/lithium_ion_battery.py
 %%PYTHON%%%%DATADIR%%/samples/python/kinetics/mechanism_reduction.py
 %%PYTHON%%%%DATADIR%%/samples/python/kinetics/reaction_path.py
@@ -798,8 +842,6 @@ libdata/pkgconfig/cantera.pc
 %%PYTHON%%%%DATADIR%%/samples/python/onedim/stagnation_flame.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/1D_packed_bed.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/1D_pfr_surfchem.py
-%%PYTHON%%%%DATADIR%%/samples/python/reactors/NonIdealShockTube.py
-%%PYTHON%%%%DATADIR%%/samples/python/reactors/PorousMediaBurner.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/README.rst
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/combustor.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/continuous_reactor.py
@@ -808,10 +850,13 @@ libdata/pkgconfig/cantera.pc
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/fuel_injection.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/ic_engine.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/mix1.py
+%%PYTHON%%%%DATADIR%%/samples/python/reactors/nanosecond_pulse_discharge.py
+%%PYTHON%%%%DATADIR%%/samples/python/reactors/non_ideal_shock_tube.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/periodic_cstr.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/pfr.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/piston.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/plasma.py
+%%PYTHON%%%%DATADIR%%/samples/python/reactors/porous_media_burner.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/preconditioned_integration.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/reactor1.py
 %%PYTHON%%%%DATADIR%%/samples/python/reactors/reactor2.py
@@ -827,6 +872,7 @@ libdata/pkgconfig/cantera.pc
 %%PYTHON%%%%DATADIR%%/samples/python/thermo/isentropic.py
 %%PYTHON%%%%DATADIR%%/samples/python/thermo/isentropic_units.py
 %%PYTHON%%%%DATADIR%%/samples/python/thermo/mixing.py
+%%PYTHON%%%%DATADIR%%/samples/python/thermo/plasma-eedf.py
 %%PYTHON%%%%DATADIR%%/samples/python/thermo/plasma_equilibrium.py
 %%PYTHON%%%%DATADIR%%/samples/python/thermo/rankine.py
 %%PYTHON%%%%DATADIR%%/samples/python/thermo/rankine_units.py
@@ -835,39 +881,10 @@ libdata/pkgconfig/cantera.pc
 %%PYTHON%%%%DATADIR%%/samples/python/thermo/vapordome.py
 %%PYTHON%%%%DATADIR%%/samples/python/transport/README.rst
 %%PYTHON%%%%DATADIR%%/samples/python/transport/dusty_gas.py
+%%PYTHON%%%%DATADIR%%/samples/python/transport/high_pressure_transport.py
 %%PYTHON%%%%DATADIR%%/samples/python/transport/multiprocessing_viscosity.py
-%%OCTAVE%%%%DATADIR%%/samples/matlab/PFR_solver.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/Plug_Flow_Reactor.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/catcomb.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/conhp.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/conuv.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/diffflame.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/equil.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/flame.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/flame1.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/flame2.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/ignite.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/ignite_hp.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/ignite_uv.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/isentropic.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/lithium_ion_battery.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/periodic_cstr.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/prandtl1.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/prandtl2.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/rankine.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/reactor1.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/reactor2.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/reactor_ode.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/surfreactor.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/test_examples.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/tut1.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/tut2.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/tut3.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/tut4.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/tut5.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/tut6.m
-%%OCTAVE%%%%DATADIR%%/samples/matlab/tut7.m
 share/man/man1/ck2yaml.1.gz
 share/man/man1/cti2yaml.1.gz
 share/man/man1/ctml2yaml.1.gz
+share/man/man1/lxcat2yaml.1.gz
 share/man/man1/yaml2ck.1.gz