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2025Q4
ports/science
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Nuno Teixeira 49311eaa1a science/gramps: Update to 6.0.6 
ChangeLog:	https://github.com/gramps-project/gramps/releases/tag/v6.0.6
MFH:		2025Q4 (maintenance release)
(cherry picked from commit 4aed5610f3)
2025-11-09 10:58:25 +00:00
..
2d-rewriter
…
abinit
science/abinit: update 10.4.5 → 10.4.7
2025-09-07 15:23:01 -07:00
acados
science/acados: New port: Fast and embedded solvers for nonlinear optimal control
2025-01-12 14:36:40 -08:00
afni
science/afni: Update to 25.2.17
2025-09-26 17:46:23 +02:00
agrum
science/agrum: update 2.2.0 → 2.2.1
2025-09-28 13:42:42 -07:00
aircraft-datcom
…
ALPSCore
*/*: Älven's ports to use FreeBSD.org email
2025-07-29 01:38:52 +04:00
antioch
…
apbs
…
arbor
Revert "science/arbor: update 0.10.1 → 0.11.0"
2025-11-03 23:25:19 -08:00
ascent
science/ascent: update 0.9.3 → 0.9.5
2025-10-18 11:26:44 -07:00
atompaw
science/atompaw: Fix building with Flang
2025-09-05 17:34:12 +03:00
avogadro2
science/avogadro2: update 1.99.0 → 1.100.0
2025-01-22 19:15:25 -08:00
avogadrolibs
math/vtk9: update 9.2.6 → 9.5.0
2025-06-27 10:00:41 -07:00
axom
*: Bump PORTREVISION for devel/libfmt update {fmt.dev}
2025-08-10 21:02:47 +02:00
bagel
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
bddsolve
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
berkeleygw
science/berkeleygw: Constrain to gfortran
2025-09-05 17:34:12 +03:00
bodr
…
bout++
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
bout++-merging-filaments
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
buddy
…
cantera
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
cardioid
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
cdf
science/cdf: improve and lint port
2025-09-09 02:10:52 +04:00
cdk
Mk/**java.mk: Convert bsd.java.mk to USES
2024-12-31 09:57:55 +01:00
cdo
science/cdo: Update to 2.5.3
2025-09-03 02:00:30 +08:00
cgnslib
science/cgnslib: Fix building with Flang
2025-09-06 23:01:19 +03:00
cgribex
science/cgribex: Clean up Makefile
2025-06-13 14:03:19 +08:00
checkmol
*/*: Bump PORTREVISION. editors/lazarus was updated to 3.8.0
2025-01-24 16:33:46 -08:00
chemical-mime-data
science/chemical-mime-data: move to new home, pet portlint (+)
2025-07-28 13:05:52 +03:00
chemicalfun
*: Bump PORTREVISION for devel/libfmt update {fmt.dev}
2025-08-10 21:02:47 +02:00
chemps2
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
chemtool
gnome.mk: rename gdkpixbuf2 to gdkpixbuf to prepare for port move
2025-03-17 00:02:08 -04:00
chemtool-devel
gnome.mk: rename gdkpixbuf2 to gdkpixbuf to prepare for port move
2025-03-17 00:02:08 -04:00
chimes-calculator
…
ChipmunkPhysics
…
chrono
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
cif-tools
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
clhep
…
clipper
science/libccp4: update 6.5.1 → 8.0.0
2025-01-27 01:58:07 -08:00
code_saturne
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
colt
Mk/Uses/java.mk: Runtime fix with USES=java:ant
2024-12-31 15:39:30 +01:00
conduit
science/conduit: update 0.9.1 → 0.9.3
2025-01-27 21:59:12 -08:00
coordgenlibs
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cp2k
science/cp2k: Update WWW
2025-09-20 01:18:27 -07:00
cp2k-data
science/cp2k{,-data}: update 2025.1 → 2025.2
2025-07-27 21:26:17 -07:00
csvtk
various: Bump Go ports for 1.24.9
2025-11-01 11:48:35 -04:00
dakota
science/dakota: prepare for Boost-1.89, do not link with stub Boost::system (+)
2025-09-30 17:40:28 +03:00
dalton
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
dd_package
…
devisor
Mk/**java.mk: Convert bsd.java.mk to USES
2024-12-31 09:57:55 +01:00
dftbplus
*/*: bump PORTREVISION to chase math/scalapack
2025-02-08 22:46:51 +01:00
dftd3
…
dftd4
science/dftd4: Add to pkg-descr
2025-09-29 00:34:04 -07:00
dimod
science/{,py-}dimod: update 0.12.20 → 0.12.21
2025-09-27 10:57:20 -07:00
dirac
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
dkh
…
dlib-cpp
science/dlib-cpp: Fixup EXTRACT_AFTER_ARGS
2025-06-08 14:16:07 +03:00
drawxtl
…
dssp
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
dwave-preprocessing
…
dynare
*/*: chase the upgrade to SuiteSparse
2025-08-01 23:08:37 +02:00
eccodes
science/eccodes: fix build with Perl != 5.40
2025-07-26 10:38:35 +02:00
elk
*/*: chase the upgrade of BLIS to 2.0
2025-07-03 11:47:18 +02:00
elmerfem
math/vtk9: update 9.2.6 → 9.5.0
2025-06-27 10:00:41 -07:00
epte
…
erd
…
ergo
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
erkale
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
erkale-pseudopotentials
…
fastcap
…
fasthenry
…
fastjet
science/fastjet: update 3.4.3 → 3.5.1
2025-08-22 14:12:21 -07:00
feff10
science/feff10: Fix building with Flang
2025-09-14 13:18:01 +03:00
fleur
libxml2: chase libxml soversion bump
2025-06-30 11:04:22 +02:00
frontistr
*/*: bump PORTREVISION to chase math/scalapack
2025-02-08 22:46:51 +01:00
fsom
…
fvcom
…
fvcom-mpi
…
gabedit
gnome.mk: rename gdkpixbuf2 to gdkpixbuf to prepare for port move
2025-03-17 00:02:08 -04:00
gamess-us
…
gbtolib
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
gchemutils
libxml2: chase libxml soversion bump
2025-06-30 11:04:22 +02:00
gcp
science/gcp: update 2.3.1 → 2.3.2
2024-09-09 12:09:43 -07:00
gdma
…
geant4
science/geant4: Update to 11.3.2
2025-05-09 15:36:56 +01:00
gemmi
science/{,py-}gemmi: update 0.7.1 → 0.7.3
2025-07-22 00:10:56 -07:00
getdp
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
ghemical
libxml2: chase libxml soversion bump
2025-06-30 11:04:22 +02:00
ghmm
libxml2: chase libxml soversion bump
2025-06-30 11:04:22 +02:00
gnudatalanguage
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
gpaw-setups
…
gramps
science/gramps: Update to 6.0.6
2025-11-09 10:58:25 +00:00
gromacs
science/gromacs: Remove libxml2 dependency
2025-02-14 02:30:54 -08:00
gsmc
…
h5utils
…
h5z-zfp
…
harminv
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
hdf
science/hdf: Remove GNU_CONFIGURE_MANPREFIX
2025-04-09 21:54:38 +08:00
hdf5
science/hdf5: Convert to USES= cmake:testing
2025-01-18 18:23:17 +01:00
hdf5-18
…
hdf5-110
…
healpix
…
helfem
…
hepmc3
…
highfive
science/highfive: update 2.10.0 → 2.10.1
2024-12-05 10:11:10 -08:00
hypre
*/*: Bump dependencies for math/superlu update 5.3.0 => 7.0.1
2025-08-03 21:59:41 +04:00
iboview
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
InsightToolkit
math/vtk9: update 9.2.6 → 9.5.0
2025-06-27 10:00:41 -07:00
InsightToolkit501
…
isaac-cfd
science/isaac-cfd: Fix building with Flang
2025-10-01 21:05:17 +03:00
jdftx
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
jmol
Mk/Uses/java.mk: Runtime fix with USES=java:ant
2024-12-31 15:39:30 +01:00
jstrack
…
kalzium
KDE: Update KDE Gear to 25.08.1
2025-09-13 15:45:52 +03:00
kim-api
science/kim-api: update 2.3.0 → 2.4.1
2025-09-06 00:18:59 -07:00
kplib
…
kst2
science/kst2: update to 2.1
2024-10-31 13:26:54 +03:00
lammps
math/vtk9: update 9.2.6 → 9.5.0
2025-06-27 10:00:41 -07:00
lamprop
…
latte
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
libaec
science/libaec: Update to 1.1.4
2025-06-26 19:29:36 +08:00
libccp4
science/libccp4: Improve pkg-descr
2025-09-29 00:40:47 -07:00
libcifpp
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
libcint
science/libcint: update 6.1.2 → 6.1.3
2025-08-19 02:39:04 -07:00
libctl
*/*: Bump PORTREVISION after math/nlopt update
2025-03-01 16:09:11 +01:00
libecpint
…
libefp
…
libgetar
…
libghemical
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
libgridxc
…
libint
…
libint2
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
libint2-psi4
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
libkml
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
liblinear
science/liblinear: Update to 2.49
2025-06-02 00:23:12 +08:00
libmbd
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
libmsym
…
libnegf
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
liboglappth
…
libpsml
science/libpsml: New port: Library to handle pseudopotentials in PSML format
2024-09-02 00:54:42 -07:00
libquantum
…
libssm
science/libccp4: update 6.5.1 → 8.0.0
2025-01-27 01:58:07 -08:00
libsvm
*/*: Reset MAINTAINER for freqlabs ports due to fatal email bounces for multiple months
2024-11-12 09:44:30 -05:00
libsvm-python
…
libvdwxc
…
libxc
all: return jmd's ports to the pool after safekeeping their commit bit.
2024-11-28 17:10:52 +01:00
liggghts
math/vtk9: update 9.2.6 → 9.5.0
2025-06-27 10:00:41 -07:00
linearelasticity
science/linearelasticity: fix build on powerpc
2024-12-31 15:00:07 +01:00
linux-ai-ml-env
science/linux-ai-ml-env: Linux Python environment for running AI and ML stuff
2025-03-28 15:37:25 +03:00
linux-zotero
…
luscus
gnome.mk: rename gdkpixbuf2 to gdkpixbuf to prepare for port move
2025-03-17 00:02:08 -04:00
m-aneos
…
madness
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
maeparser
science/maeparser: Improve pkg-descr
2025-09-29 00:56:17 -07:00
massxpert
…
mbdyn
*/*: chase the upgrade to SuiteSparse
2025-08-01 23:08:37 +02:00
mcpl
science/mcpl: not for 32 bit architectures
2025-08-16 21:17:27 +02:00
mcstas
…
mcstas-comps
…
mctc-lib
science/mctc-lib: update 0.3.2 → 0.4.0
2025-04-03 18:56:06 -07:00
mcxtrace
…
mcxtrace-comps
…
mdynamix
…
medit
…
meep
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
metaphysicl
…
minc2
science/minc2: Fix build with netcdf 4.9.3+
2025-02-17 16:21:25 +08:00
mmdb2
…
mmg
math/vtk9: update 9.2.6 → 9.5.0
2025-06-27 10:00:41 -07:00
mmtf-cpp
…
mol2ps
*/*: Bump PORTREVISION. editors/lazarus was updated to 3.8.0
2025-01-24 16:33:46 -08:00
molgif
various: Bump Go ports for 1.24.9
2025-11-01 11:48:35 -04:00
molscript
all: drop support for expired FreeBSD 14.0
2024-10-01 20:56:20 +02:00
molsketch
science/molsketch: update 0.8.1 → 0.8.2; switch to Qt6
2025-06-23 03:26:41 -07:00
mopac
science/mopac: Improve pkg-descr
2025-09-29 00:42:42 -07:00
mp2d
…
mpb
science/mpb: Update to 1.12.0
2025-04-12 22:11:32 +02:00
mpqc
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
mrchem
…
mrcpp
…
msms
…
mstore
…
multicharge
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
multiwfn
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
mutationpp
…
namd
…
ncrystal
science/{,py-}ncrystal: update 4.2.6 → 4.2.8
2025-08-07 07:12:32 -07:00
nest
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
netcdf
science/netcdf: Fix pkg-plist
2025-05-09 11:30:16 +02:00
netcdf-cxx
science/netcdf-cxx: Cosmetic change
2024-11-15 18:17:06 +08:00
netcdf-fortran
science/netcdf-fortran: Update to 4.6.2
2025-04-18 13:37:07 +08:00
nifticlib
…
nlcglib
science/nlcglib: OPENMP option if OFF and ON is broken where OpenMP isn't available
2025-02-20 08:05:50 -07:00
nwchem
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
nwchem-data
science/nwchem{,-data}: update 7.2.2 → 7.2.3
2024-08-30 17:04:48 -07:00
ocean
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
octopus
*/*: Bump PORTREVISION after math/nlopt update
2025-03-01 16:09:11 +01:00
openbabel
libxml2: chase libxml soversion bump
2025-06-30 11:04:22 +02:00
openems
math/vtk9: update 9.2.6 → 9.5.0
2025-06-27 10:00:41 -07:00
openkim-models
…
openmc
*: Bump PORTREVISION for devel/libfmt update {fmt.dev}
2025-08-10 21:02:47 +02:00
openmodelica
science/openmodelica: update 1.25.2 → 1.25.4
2025-09-12 02:00:02 -07:00
openmolcas
science/openmolcas: Fix build with gcc14
2024-09-05 14:04:30 -07:00
openmx
*/*: bump PORTREVISION to chase math/scalapack
2025-02-08 22:46:51 +01:00
opensim-core
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
opensph
*: Bump PORTREVISION for math/Imath update
2025-08-10 21:02:44 +02:00
opsin
science/opsin: Improve pkg-descr
2025-09-29 01:02:45 -07:00
optench
…
orthanc
*/*: Bump PORTREVISION after libuuid/libblkid switch
2025-06-30 17:00:39 +02:00
orthanc-dicomweb
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
orthanc-mysql
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
orthanc-postgresql
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
orthanc-webviewer
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
p5-Chemistry-3DBuilder
…
p5-Chemistry-Bond-Find
…
p5-Chemistry-Canonicalize
…
p5-Chemistry-Elements
science/p5-Chemistry-Elements: Update to 1.081
2025-04-15 23:42:26 +00:00
p5-Chemistry-File-MDLMol
…
p5-Chemistry-File-Mopac
…
p5-Chemistry-File-PDB
…
p5-Chemistry-File-SLN
…
p5-Chemistry-File-SMARTS
…
p5-Chemistry-File-SMILES
…
p5-Chemistry-File-VRML
…
p5-Chemistry-File-XYZ
…
p5-Chemistry-FormulaPattern
…
p5-Chemistry-InternalCoords
…
p5-Chemistry-Isotope
…
p5-Chemistry-MacroMol
…
p5-Chemistry-MidasPattern
…
p5-Chemistry-Mok
…
p5-Chemistry-Mol
…
p5-Chemistry-OpenSMILES
science/p5-Chemistry-OpenSMILES: Update to 0.12.0
2025-04-30 07:59:49 +00:00
p5-Chemistry-Pattern
…
p5-Chemistry-Reaction
…
p5-Chemistry-Ring
…
p5-Geo-BUFR
…
p5-Geo-Calc
…
p5-Geo-Coordinates-Converter
…
p5-Geo-Coordinates-Converter-iArea
…
p5-Geo-Coordinates-Transform
…
p5-Geo-WebService-Elevation-USGS
science/p5-Geo-WebService-Elevation-USGS: Update to 0.201
2025-02-03 23:54:07 +08:00
p5-Mcstas-Tools
math/p5-PDL: Move math/PDL to math/p5-PDL
2025-01-29 00:16:29 +08:00
p5-PerlMol
…
p5-Physics-Unit
science/p5-Physics-Unit: Update to 0.60
2024-11-03 21:23:29 +08:00
packmol
science/packmol: Update to 21.1.0
2025-08-20 16:36:17 +01:00
pagmo2
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
paje
GNUstep: Bump dependent PORTREVISION
2025-08-12 08:03:53 -03:00
paraview
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
parthenon
science/parthenon: Broken on armv7
2025-02-14 02:42:00 -08:00
pastix
science/pastix: undeprecate, lang/julia is no longer expired
2025-06-02 19:40:48 +02:00
pcmsolver
science/pcmsolver: Fix build
2025-10-14 20:42:08 -07:00
PETSc
*/*: chase the upgrade of BLIS to 2.0
2025-07-03 11:47:18 +02:00
phonopy
science/{,py-}phonopy: update 2.41.2 → 2.42.0
2025-07-21 09:36:47 -07:00
plumed
science/plumed: Improve pkg-descr
2025-09-29 00:38:42 -07:00
pnetcdf
science/pnetcdf: Update to 1.14.1
2025-09-08 07:03:19 +08:00
polytope
…
precice
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
psi4
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
pulseview
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
py-abipy
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-access
graphics/py-geopandas: Update to 0.14.4
2024-08-28 08:54:30 +02:00
py-arbor
science/py-arbor: update 0.10.1 → 0.11.0
2025-11-02 10:21:31 -08:00
py-arch
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-asap3
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-asdf
science/py-asdf: Update to 4.5.0
2025-09-30 18:51:02 +08:00
py-asdf-standard
science/py-asdf-standard: Update to 1.4.0
2025-09-08 07:04:06 +08:00
py-asdf-transform-schemas
science/py-asdf-transform-schemas: Update to 0.6.0
2025-06-02 00:23:34 +08:00
py-ase
science/py-ase: update 3.23.0 → 3.26.0
2025-09-06 00:19:00 -07:00
py-atomium
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-avogadrolibs
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-boutdata
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-boututils
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-cdo
…
py-cfgrib
science/py-cfgrib: Update to 0.9.15.0
2024-12-31 23:50:11 +08:00
py-chainer
devel/protobuf: Update to 29.4
2025-04-18 13:37:04 +08:00
py-chainer-chemistry
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-chempy
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-cirq-aqt
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-cirq-core
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-cirq-google
science/py-cirq-*: update 1.4.1 → 1.5.0
2025-04-11 01:17:06 -07:00
py-cirq-ionq
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-cirq-pasqal
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-cirq-rigetti
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-coards
…
py-dftbplus
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-dftd4
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-dimod
science/{,py-}dimod: update 0.12.20 → 0.12.21
2025-09-27 10:57:20 -07:00
py-dipy
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-dlib
science/py-dlib: Use more system dependencies
2025-06-08 14:03:31 +03:00
py-dwave-cloud-client
science/py-dwave-cloud-client: update 0.12.0 → 0.14.0
2025-09-27 18:38:27 -07:00
py-dwave-gate
science/py-dwave-gate: New port: DWave: Gate model library
2025-09-27 18:38:24 -07:00
py-dwave-greedy
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-dwave-hybrid
science/py-dwave-hybrid: update 0.6.11 → 0.6.14
2025-09-27 18:38:29 -07:00
py-dwave-inspector
science/py-dwave-inspector: update 0.5.1 → 0.5.5
2025-09-27 18:38:30 -07:00
py-dwave-neal
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-dwave-networkx
science/py-dwave-networkx: update 0.8.15 → 0.8.18
2025-09-27 18:38:26 -07:00
py-dwave-ocean-sdk
science/py-dwave-ocean-sdk: update 6.9.0 → 9.0.0
2025-09-27 18:38:31 -07:00
py-dwave-optimization
science/py-dwave-optimization: update 0.1.0 → 0.6.6
2025-09-27 18:38:28 -07:00
py-dwave-preprocessing
science/py-dwave-preprocessing: update 0.6.6 → 0.6.10
2025-09-27 18:38:28 -07:00
py-dwave-samplers
science/py-dwave-samplers: update 1.3.0 → 1.6.0
2025-09-27 18:38:27 -07:00
py-dwave-system
science/py-dwave-system: update 1.25.0 → 1.33.0
2025-09-27 18:38:29 -07:00
py-dwave-tabu
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-dwavebinarycsp
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-earthpy
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-eccodes
science/py-eccodes: Update to 2.43.0
2025-08-13 02:15:47 +08:00
py-emmet-core
science/py-emmet-core: Fix dependency
2025-09-07 20:07:58 -07:00
py-esda
…
py-fresnel
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-gemmi
science/{,py-}gemmi: update 0.7.1 → 0.7.3
2025-07-22 00:10:56 -07:00
py-geolinks
…
py-geomet
…
py-geometer
science/py-geometer: Update to 0.4.1
2025-06-18 01:47:56 +08:00
py-geometric
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-gpaw
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-GPy
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-GPyOpt
science/py-GPyOpt: Add comment
2025-03-16 12:18:36 -07:00
py-gsd
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-h5json
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-h5netcdf
science/py-h5netcdf: New port: netCDF4 via h5py
2025-03-08 03:15:44 -08:00
py-h5py
science/py-h5py: Update to 3.13.0
2025-02-20 15:59:07 +08:00
py-h5pyd
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-HepMC3
science/py-HepMC3: Broken on armv7; Update WWW
2024-11-16 21:27:48 -08:00
py-hiphive
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-HofstadterTools
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-hoomd-blue
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-icet
science/py-icet: update 3.0 → 3.1
2025-09-28 13:42:42 -07:00
py-inequality
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-ipygany
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-jupyter_jsmol
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-kim-query
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-kimpy
science/py-kimpy: update 2.1.1 → 2.1.3
2025-09-06 00:19:00 -07:00
py-kinematics
…
py-kliff
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-kpLib
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-liac-arff
…
py-libgetar
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-libpysal
…
py-lifelines
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-MDAnalysis
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-MDAnalysisTests
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-mdp
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-mercantile
science/py-mercantile: Add make test
2025-02-28 18:34:43 +08:00
py-meshio
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-mmcif
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-mmtf-python
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-molmod
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-mp-api
science/py-mp-api: Fix build by adjusting the pydantic dependency
2025-09-24 01:58:27 -07:00
py-mpcontribs-client
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-mplhep
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-mplhep-data
science/py-mplhep-data: update 0.0.3 → 0.0.4
2024-12-17 01:45:31 -08:00
py-mrchem
…
py-ncrystal
science/{,py-}ncrystal: update 4.2.6 → 4.2.8
2025-08-07 07:12:32 -07:00
py-netCDF4
science/py-netCDF4: Update version 1.7.0=>1.7.2
2025-03-28 12:10:18 +01:00
py-netcdf-flattener
…
py-nglview
…
py-nibabel
science/py-nibabel: update 5.3.0 → 5.3.2
2024-11-17 10:10:31 -08:00
py-obspy
science/py-obspy: Fix build
2025-09-11 02:45:51 +00:00
py-oddt
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-openbabel
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-openEMS
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
py-OpenFermion
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-OpenFermion-Dirac
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-OpenFermion-PySCF
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-OpenMC
*/*: switch dependency from devel/py-lxml5 to devel/py-lxml
2025-09-15 22:55:40 +09:00
py-openpiv
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-optking
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-paida
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-paramz
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-penaltymodel
science/py-penaltymodel: update 1.1.0 → 1.3.0
2025-09-27 18:38:26 -07:00
py-periodictable
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-phono3py
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-phonopy
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-pnetcdf
science/pnetcdf: Update to 1.14.1
2025-09-08 07:03:19 +08:00
py-PubChemPy
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-pupynere
…
py-py3Dmol
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-pyaixi
…
py-pyberny
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-pycsw
*/*: switch dependency from devel/py-lxml5 to devel/py-lxml
2025-09-15 22:55:40 +09:00
py-pydicom
science/py-pydicom: update 3.0.1
2024-10-14 06:32:50 +00:00
py-PyFR
science/py-PyFR: update 1.15.0 → 2.1
2025-04-12 15:53:22 -07:00
py-pygeodesy
…
py-pygeometa
*/*: switch dependency from devel/py-lxml5 to devel/py-lxml
2025-09-15 22:55:40 +09:00
py-pygmo2
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-pyked
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-pymatgen
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-pymatgen-analysis-alloys
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-pymbd
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-pymol
libxml2: chase libxml soversion bump
2025-06-30 11:04:22 +02:00
py-PyNE
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-pyosf
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-pyphot
science/py-pyphot: update 1.4.7 → 1.6.0
2025-01-22 19:53:16 -08:00
py-pyprecice
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-pyqubo
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-pyscf
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-pyteomics
*/*: switch dependency from devel/py-lxml5 to devel/py-lxml
2025-09-15 22:55:40 +09:00
py-qcelemental
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-qcengine
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-qiskit
science/py-qiskit: Update to 2.1.2
2025-09-12 00:41:47 +00:00
py-qspin
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-quantities
science/py-quantities: update 0.16.1 → 0.16.2
2025-07-22 00:10:54 -07:00
py-rmf
science/{,py-}rmf: Update WWW
2025-07-21 15:01:11 -07:00
py-rmsd
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-ruffus
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-sarpy
*/*: switch dependency from devel/py-lxml5 to devel/py-lxml
2025-09-15 22:55:40 +09:00
py-scikit-fuzzy
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-scikit-learn
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-scikit-optimize
science/py-scikit-optimize: Update to 0.10.2
2024-09-30 21:36:36 +08:00
py-scikit-sparse
science/py-scikit-sparse: Fix incorrect distinfo
2025-10-29 08:30:51 +01:00
py-scimath
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-scipy
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-scoria
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-sdf
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-seekpath
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-segregation
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
py-segyio
science/py-segyio: Remove unnecessary dependency
2025-03-16 16:48:12 -07:00
py-signac
…
py-SimpleSpectral
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-sklearn-pandas
…
py-skrebate
…
py-spaghetti
…
py-spglib
science/{,py-}spglib: update 2.5.0 → 2.6.0
2025-07-22 00:10:55 -07:00
py-symfc
science/py-symfc: update 1.2.2 → 1.3.1
2025-02-06 09:02:51 -08:00
py-tensorflow
science/py-tensorflow: Update 2.9.1 -> 2.13.1
2025-07-08 00:31:22 +08:00
py-thewalrus
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-tobler
science/py-tobler: Update to 0.12.1
2025-02-03 23:51:31 +08:00
py-trainstation
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-trx-python
science/py-trx-python: Add NO_ARCH
2025-04-09 21:57:46 +08:00
py-tweedledum
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-vedo
math/vtk9: update 9.2.6 → 9.5.0
2025-06-27 10:00:41 -07:00
py-veusz
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
py-xbout
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
pybrain
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
pynn
python: bump all USE_PYTHON=distutils consumers after RUN_DEPENDS removal
2025-03-07 23:05:21 -05:00
q
…
qbox
*/*: Switch to misc/libuuid and misc/libblkid
2025-06-30 16:57:32 +02:00
qcl
…
qiskit-aer
*: Bump PORTREVISION for devel/libfmt update {fmt.dev}
2025-08-10 21:02:47 +02:00
qmcpack
libxml2: chase libxml soversion bump
2025-06-30 11:04:22 +02:00
qt6-quick3dphysics
Qt6: Update to 6.9.3
2025-10-04 00:11:16 -04:00
quantum-espresso
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
quantum-espresso-pseudopotentials
…
quantum-jet
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
qwalk
science/qwalk: Improve pkg-descr
2025-09-29 00:50:37 -07:00
R-cran-bayesm
…
R-cran-cmprsk
…
R-cran-DCluster
…
R-cran-e1071
science/R-cran-e1071: Update to 1.7-16
2024-09-19 09:24:55 +01:00
R-cran-Epi
science/R-cran-Epi: Update to 2.60
2025-07-13 15:48:11 +00:00
R-cran-epicalc
…
R-cran-etm
science/R-cran-etm: Update to 1.1.2
2025-04-20 20:27:58 +00:00
R-cran-FAdist
…
R-cran-fastICA
science/R-cran-fastICA: Update to 1.2.7
2025-03-13 02:35:13 +00:00
R-cran-kernlab
science/R-cran-kernlab: Update to 0.9-33
2024-08-15 03:12:49 +00:00
R-cran-ks
science/R-cran-ks: upgrade to 1.15.0
2025-05-04 21:45:01 +02:00
R-cran-snow
…
R-cran-som
science/R-cran-som: Update to 0.3-5.2
2024-09-22 11:04:08 +00:00
R-cran-udunits2
science/R-cran-udunits2: Update to 0.13.2.2
2025-07-25 04:02:12 +00:00
rdkit
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
rmf
science/{,py-}rmf: Update WWW
2025-07-21 15:01:11 -07:00
rubygem-ai4r
…
rubygem-cdo
…
rubygem-rgeo
…
rubygem-rgeo-geojson
science/rubygem-rgeo-geojson: Update to 2.2.0
2024-07-24 19:45:20 +08:00
rubygem-rgeo-proj4
*/*: Bump consumers of graphics/proj
2024-12-16 23:42:17 +01:00
rubygem-rgeo-shapefile
…
rubygem-ruby-netcdf
…
salome-configuration
science/salome-{configuration, kernel}: Fix fetch, improve, undeprecate
2025-09-21 21:30:06 +04:00
salome-kernel
science/salome-{configuration, kernel}: Fix fetch, improve, undeprecate
2025-09-21 21:30:06 +04:00
scidavis
science/scidavis: makr broken with PYTHON option
2024-10-24 15:26:07 +03:00
sciplot
…
seacas
*: Bump PORTREVISION for devel/libfmt update {fmt.dev}
2025-08-10 21:02:47 +02:00
segyio
science/{,py-}segyio: update 1.9.12 → 1.9.13
2025-02-06 07:05:46 -08:00
serac
science/hypre: update 2.32.0 → 2.33.0
2025-04-03 18:56:10 -07:00
shelxle
science/shelxle: update 1.0.1697 → 1.0.1703
2024-12-19 22:05:52 -08:00
siconos
*/*: chase the upgrade to SuiteSparse
2025-08-01 23:08:37 +02:00
siesta
*/*: bump PORTREVISION to chase blas/lapack, Suitesparse and BLIS
2025-01-24 13:18:28 +01:00
sigrok-cli
…
sigrok-firmware
…
sigrok-firmware-fx2lafw
…
sigrok-firmware-utils
…
silo
…
simbody
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
simgrid
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
simint
…
simlib
…
simple-dftd3
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
simsmith
Mk/**java.mk: Convert bsd.java.mk to USES
2024-12-31 09:57:55 +01:00
sirius
science/sirius: update 7.6.1 → 7.7.0
2025-04-17 02:54:09 -07:00
smoldyn
science/smoldyn: update 2.74 → 2.75
2025-08-23 01:22:30 -07:00
sparta
science/sparta: update 18Jul2022 → 4Sep2024
2024-09-04 20:01:34 -07:00
spglib
science/{,py-}spglib: update 2.5.0 → 2.6.0
2025-07-22 00:10:55 -07:00
spheral
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
step
KDE: Update KDE Gear to 25.08.1
2025-09-13 15:45:52 +03:00
sz3
science/sz3: Update to 3.3.0
2025-09-08 07:03:20 +08:00
tblite
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
teem
…
tfel
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
tfel-edf
devel/boost: bump consumers after Boost update
2025-06-02 03:40:43 +03:00
thermofun
python.mk: rename PYTHON_EXT_SUFFIX to PYTHON_TAG, document, etc
2025-06-19 16:28:47 -04:00
tinker
science/tinker: update 25.5 → 25.5.2
2025-10-13 19:16:12 -07:00
trilinos
*/*: chase the upgrade to SuiteSparse
2025-08-01 23:08:37 +02:00
ttk
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
tweedledum
…
udunits
science/udunits: Cosmetic change
2024-11-15 18:17:06 +08:00
ukrmol+
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
v_sim
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
vipster
*: Bump PORTREVISION for devel/libfmt update {fmt.dev}
2025-08-10 21:02:47 +02:00
vmd
science/vmd: Improve pkg-descr
2025-09-29 11:17:08 -07:00
voro++
…
votca
science/votca: update 2025 → 2025.1
2025-10-12 22:33:25 -07:00
wannier90
science/wannier90: Improve pkg-descr
2025-09-29 00:59:27 -07:00
wwplot
all: bump PORTREVISION after updating graphics/libyuv
2025-08-31 12:30:51 +02:00
wxmacmolplt
…
xcfun
…
xcrysden
…
xdrawchem
…
xtb
*/*: bump PORTREVISION after OpenBLAS upgrade
2025-01-28 17:42:55 +01:00
yoda
science/yoda: update 1.9.8 → 2.0.2
2025-01-15 14:02:09 -08:00
zotero
science/zotero: Fix libreoffice plugin integration
2025-04-15 11:16:45 +02:00
zx
…
Makefile
science/py-dwave-gate: New port: DWave: Gate model library
2025-09-27 18:38:24 -07:00